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Experimental biology · HRP enzyme kinetics

HRP enzyme kinetics

How do you turn a colour change into an enzyme model?

Project account · methods and observations from my study and research notes.

01 / The question

How do you turn a colour change into an enzyme model?

The horseradish peroxidase project used optical measurements to characterise enzyme activity. The challenge was to move from an instrument signal to an interpretable rate model.

Absorbance traces → Initial rates → Kinetic parameters
Conceptual illustration of the approach

02 / The intuition

A mechanism worth testing.

Calibration and controls connect absorbance to chemistry. The time evolution matters before any kinetic parameters are fitted.

03 / The work

Inside the method.

Explore each part of the approach.

01Acquire kinetic traces

Multi-wavelength spectrophotometry and a microplate reader tracked the assay over time.

02Estimate rates

Dilution series, blanks and replicates supported rate estimation and calibration.

03Fit and question the model

The analysis considered Michaelis–Menten parameters, assay sensitivity and comparison with literature values.

04 / The observations

What emerged.

The notes document kinetic fitting and analytical-limit calculations. Original curves and fit uncertainties are not yet included.

This account is based on recorded project notes. Original reports, figures and datasets are not embedded here.

05 / The limits

Where the evidence stops.

Parameters depend on the assay conditions and fitting assumptions. Neither precision nor a detection limit is asserted without the corresponding measurements.

The academic foundations

Where this work connects.

Biology & biotechnologyMathematics & statistics
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